STRINGSTRING
ompR protein (Burkholderia cepacia) - STRING interaction network
"ompR" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompRannotation not available (241 aa)    
Predicted Functional Partners:
WI67_10300
annotation not available (453 aa)
  0.995
WI67_12985
annotation not available (438 aa)
   
  0.946
DM42_7278
annotation not available (425 aa)
   
  0.940
WI67_12990
Two-component system response regulator; Transcriptional regulatory , C terminal family protein (241 aa)
   
   
0.808
phoR
PAS domain-containing sensor histidine kinase; phoR_proteo- phosphate regulon sensor kinase PhoR (439 aa)
 
  0.779
DM42_1572
annotation not available (751 aa)
   
 
  0.624
WL94_32925
annotation not available (380 aa)
   
     
  0.593
DM42_7128
annotation not available (768 aa)
 
  0.592
WL94_08570
annotation not available (791 aa)
   
 
  0.577
WI67_22580
annotation not available (121 aa)
 
 
  0.573
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (22%) [HD]