Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2782 | DM42_3181 | DM42_2782 | DM42_3181 | annotation not available | annotation not available | 0.861 |
DM42_2782 | DM42_3182 | DM42_2782 | DM42_3182 | annotation not available | annotation not available | 0.708 |
DM42_3181 | DM42_2782 | DM42_3181 | DM42_2782 | annotation not available | annotation not available | 0.861 |
DM42_3181 | DM42_3182 | DM42_3181 | DM42_3182 | annotation not available | annotation not available | 0.847 |
DM42_3181 | DM42_4324 | DM42_3181 | DM42_4324 | annotation not available | annotation not available | 0.489 |
DM42_3181 | fabZ | DM42_3181 | DM42_3090 | annotation not available | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs | 0.414 |
DM42_3181 | ubiG | DM42_3181 | DM42_789 | annotation not available | 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway | 0.475 |
DM42_3182 | DM42_2782 | DM42_3182 | DM42_2782 | annotation not available | annotation not available | 0.708 |
DM42_3182 | DM42_3181 | DM42_3182 | DM42_3181 | annotation not available | annotation not available | 0.847 |
DM42_4324 | DM42_3181 | DM42_4324 | DM42_3181 | annotation not available | annotation not available | 0.489 |
fabZ | DM42_3181 | DM42_3090 | DM42_3181 | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs | annotation not available | 0.414 |
ubiG | DM42_3181 | DM42_789 | DM42_3181 | 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway | annotation not available | 0.475 |