STRINGSTRING
DM42_3218 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3218" - annotation not available in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3218annotation not available (96 aa)    
Predicted Functional Partners:
DM42_3416
annotation not available (770 aa)
   
        0.710
DM42_1347
Conserved hypothetical protein (110 aa)
   
        0.674
WI67_07185
DUF1656 domain-containing protein (67 aa)
   
          0.545
WL94_28810
annotation not available (559 aa)
     
        0.538
WI67_08015
prkA serine kinase C-terminal domain protein (640 aa)
     
        0.532
fusB
Fusaric acid resistance protein FusB; Involved in the resistance (detoxification) of the fungal toxin fusaric acid (734 aa)
   
          0.530
WL94_11780
annotation not available (727 aa)
   
          0.451
WL94_31525
asnASE_II- L-asparaginase, type II family protein; Belongs to the asparaginase 1 family (340 aa)
              0.444
WL94_14480
annotation not available (356 aa)
   
          0.443
DM42_6254
Pili assembly chaperone PapD, C-terminal domain protein (255 aa)
   
          0.434
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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