Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2003 | DM42_3226 | DM42_2003 | DM42_3226 | annotation not available | annotation not available | 0.516 |
DM42_2003 | DM42_5096 | DM42_2003 | DM42_5096 | annotation not available | Conserved hypothetical protein | 0.400 |
DM42_2398 | DM42_2580 | DM42_2398 | DM42_2580 | annotation not available | Pseudouridine synthase family protein; Belongs to the pseudouridine synthase RsuA family | 0.636 |
DM42_2398 | DM42_3226 | DM42_2398 | DM42_3226 | annotation not available | annotation not available | 0.642 |
DM42_2398 | ggt | DM42_2398 | DM42_2188 | annotation not available | Gamma-glutamyltranspeptidase / glutathione hydrolase; G_glut_trans: gamma-glutamyltransferase | 0.708 |
DM42_2580 | DM42_2398 | DM42_2580 | DM42_2398 | Pseudouridine synthase family protein; Belongs to the pseudouridine synthase RsuA family | annotation not available | 0.636 |
DM42_2580 | DM42_3226 | DM42_2580 | DM42_3226 | Pseudouridine synthase family protein; Belongs to the pseudouridine synthase RsuA family | annotation not available | 0.632 |
DM42_2580 | ggt | DM42_2580 | DM42_2188 | Pseudouridine synthase family protein; Belongs to the pseudouridine synthase RsuA family | Gamma-glutamyltranspeptidase / glutathione hydrolase; G_glut_trans: gamma-glutamyltransferase | 0.637 |
DM42_3225 | DM42_3226 | DM42_3225 | DM42_3226 | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | annotation not available | 0.950 |
DM42_3225 | dmlR_8 | DM42_3225 | DM42_3224 | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.569 |
DM42_3226 | DM42_2003 | DM42_3226 | DM42_2003 | annotation not available | annotation not available | 0.516 |
DM42_3226 | DM42_2398 | DM42_3226 | DM42_2398 | annotation not available | annotation not available | 0.642 |
DM42_3226 | DM42_2580 | DM42_3226 | DM42_2580 | annotation not available | Pseudouridine synthase family protein; Belongs to the pseudouridine synthase RsuA family | 0.632 |
DM42_3226 | DM42_3225 | DM42_3226 | DM42_3225 | annotation not available | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.950 |
DM42_3226 | DM42_5096 | DM42_3226 | DM42_5096 | annotation not available | Conserved hypothetical protein | 0.492 |
DM42_3226 | DM42_5299 | DM42_3226 | DM42_5299 | annotation not available | annotation not available | 0.623 |
DM42_3226 | DM42_6041 | DM42_3226 | DM42_6041 | annotation not available | annotation not available | 0.600 |
DM42_3226 | DM42_6042 | DM42_3226 | DM42_6042 | annotation not available | annotation not available | 0.730 |
DM42_3226 | dmlR_8 | DM42_3226 | DM42_3224 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.493 |
DM42_3226 | ggt | DM42_3226 | DM42_2188 | annotation not available | Gamma-glutamyltranspeptidase / glutathione hydrolase; G_glut_trans: gamma-glutamyltransferase | 0.642 |
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