STRINGSTRING
DM42_3238 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3238" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3238annotation not available (351 aa)    
Predicted Functional Partners:
WL94_31625
annotation not available (315 aa)
          0.997
WI67_09910
annotation not available (298 aa)
 
        0.983
arnC
annotation not available (345 aa)
 
  0.983
WL94_31635
annotation not available (383 aa)
   
  0.973
WI67_09880
annotation not available (558 aa)
 
   
  0.916
WI67_09885
annotation not available (123 aa)
 
     
  0.830
ihfA
Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (128 aa)
 
       
  0.715
WL94_31610
annotation not available (153 aa)
         
  0.615
WL94_19465
annotation not available (347 aa)
 
 
  0.438
WI67_21300
UDP-glucose 6-dehydrogenase; NDP-sugDHase- nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (470 aa)
 
 
  0.426
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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