Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_2032 | DM42_2437 | DM42_2032 | DM42_2437 | annotation not available | annotation not available | 0.622 |
DM42_2032 | DM42_2729 | DM42_2032 | DM42_2729 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.688 |
DM42_2032 | DM42_2973 | DM42_2032 | DM42_2973 | annotation not available | Hypothetical protein; Regulator | 0.439 |
DM42_2032 | DM42_3244 | DM42_2032 | DM42_3244 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.637 |
DM42_2032 | bioC | DM42_2032 | DM42_2220 | annotation not available | Malonyl-coa o-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway | 0.762 |
DM42_2437 | DM42_2032 | DM42_2437 | DM42_2032 | annotation not available | annotation not available | 0.622 |
DM42_2437 | DM42_2729 | DM42_2437 | DM42_2729 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.635 |
DM42_2437 | DM42_2973 | DM42_2437 | DM42_2973 | annotation not available | Hypothetical protein; Regulator | 0.700 |
DM42_2437 | DM42_3244 | DM42_2437 | DM42_3244 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.652 |
DM42_2437 | bioC | DM42_2437 | DM42_2220 | annotation not available | Malonyl-coa o-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway | 0.478 |
DM42_2729 | DM42_2032 | DM42_2729 | DM42_2032 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.688 |
DM42_2729 | DM42_2437 | DM42_2729 | DM42_2437 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.635 |
DM42_2729 | DM42_3244 | DM42_2729 | DM42_3244 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Uncharacterized protein | 0.604 |
DM42_2729 | bioC | DM42_2729 | DM42_2220 | Hypothetical protein; Uncharacterized protein | Malonyl-coa o-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway | 0.472 |
DM42_2973 | DM42_2032 | DM42_2973 | DM42_2032 | Hypothetical protein; Regulator | annotation not available | 0.439 |
DM42_2973 | DM42_2437 | DM42_2973 | DM42_2437 | Hypothetical protein; Regulator | annotation not available | 0.700 |
DM42_2973 | DM42_3244 | DM42_2973 | DM42_3244 | Hypothetical protein; Regulator | Hypothetical protein; Uncharacterized protein | 0.611 |
DM42_2973 | bioC | DM42_2973 | DM42_2220 | Hypothetical protein; Regulator | Malonyl-coa o-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway | 0.505 |
DM42_3235 | DM42_3244 | DM42_3235 | DM42_3244 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.574 |
DM42_3242 | DM42_3243 | DM42_3242 | DM42_3243 | annotation not available | annotation not available | 0.951 |
page 1 of 3