STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3256annotation not available (153 aa)    
Predicted Functional Partners:
DM42_3257
annotation not available
 
     0.915
cadR
cadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator
  
   
 0.753
CueR
Merr family transcriptional regulator, gold-responsive activator of gol and ges genes; cueR: Cu(I)-responsive transcriptional regulator
  
   
 0.752
DM42_4609
annotation not available
  
     0.740
merR
Merr family transcriptional regulator, mercuric resistance operon regulatory protein; merR: Hg(II)-responsive transcriptional regulator
  
   
 0.670
DM42_4661
annotation not available
  
     0.644
DM42_6833
annotation not available
  
     0.616
DM42_3448
annotation not available
  
     0.479
DM42_3255
annotation not available
     
 0.433
merP
merP: mercuric transport protein periplasmic component
 
  
 0.417
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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