Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LipA | aceF | DM42_3264 | DM42_2952 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | annotation not available | 0.555 |
| LipA | acoA | DM42_3264 | DM42_3261 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | 0.791 |
| LipA | acoB | DM42_3264 | DM42_3262 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | 0.906 |
| LipA | acoC | DM42_3264 | DM42_3263 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | annotation not available | 0.895 |
| LipA | bkdB | DM42_3264 | DM42_477 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | annotation not available | 0.569 |
| LipA | sucB | DM42_3264 | DM42_188 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | Dihydrolipoyllysine-residue succinyltransferase, e2 component of oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2) | 0.688 |
| aceF | LipA | DM42_2952 | DM42_3264 | annotation not available | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.555 |
| aceF | acoA | DM42_2952 | DM42_3261 | annotation not available | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | 0.917 |
| aceF | acoB | DM42_2952 | DM42_3262 | annotation not available | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | 0.927 |
| aceF | acoC | DM42_2952 | DM42_3263 | annotation not available | annotation not available | 0.820 |
| aceF | bkdA1 | DM42_2952 | DM42_479 | annotation not available | annotation not available | 0.922 |
| aceF | prs | DM42_2952 | DM42_2267 | annotation not available | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P) | 0.815 |
| aceF | sucC | DM42_2952 | DM42_2423 | annotation not available | Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit | 0.985 |
| aceF | sucD | DM42_2952 | DM42_2424 | annotation not available | Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit | 0.986 |
| acoA | LipA | DM42_3261 | DM42_3264 | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.791 |
| acoA | aceF | DM42_3261 | DM42_2952 | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | annotation not available | 0.917 |
| acoA | acoB | DM42_3261 | DM42_3262 | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | 0.999 |
| acoA | acoC | DM42_3261 | DM42_3263 | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | annotation not available | 0.992 |
| acoA | bkdB | DM42_3261 | DM42_477 | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | annotation not available | 0.947 |
| acoA | sucB | DM42_3261 | DM42_188 | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | Dihydrolipoyllysine-residue succinyltransferase, e2 component of oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2) | 0.946 |
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