Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LipA | acoA | DM42_3264 | DM42_3261 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | 0.791 |
| LipA | acoB | DM42_3264 | DM42_3262 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | 0.906 |
| LipA | acoC | DM42_3264 | DM42_3263 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | annotation not available | 0.895 |
| LipA | erpA | DM42_3264 | DM42_1161 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | Iron-sulfur cluster assembly accessory family protein; Required for insertion of 4Fe-4S clusters | 0.647 |
| LipA | gcvH | DM42_3264 | DM42_1633 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | gcvH: glycine cleavage system H protein | 0.866 |
| LipA | iscA | DM42_3264 | DM42_2964 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | Iron-sulfur cluster assembly protein isca; Belongs to the HesB/IscA family | 0.647 |
| LipA | lipA | DM42_3264 | DM42_2184 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.806 |
| LipA | lipB | DM42_3264 | DM42_2183 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate | 0.994 |
| LipA | polA | DM42_3264 | DM42_4183 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.645 |
| LipA | sucB | DM42_3264 | DM42_188 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | Dihydrolipoyllysine-residue succinyltransferase, e2 component of oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2) | 0.688 |
| acoA | LipA | DM42_3261 | DM42_3264 | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.791 |
| acoA | acoB | DM42_3261 | DM42_3262 | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | 0.999 |
| acoA | acoC | DM42_3261 | DM42_3263 | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | annotation not available | 0.992 |
| acoA | gcvH | DM42_3261 | DM42_1633 | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | gcvH: glycine cleavage system H protein | 0.685 |
| acoA | sucB | DM42_3261 | DM42_188 | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | Dihydrolipoyllysine-residue succinyltransferase, e2 component of oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2) | 0.946 |
| acoB | LipA | DM42_3262 | DM42_3264 | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives | 0.906 |
| acoB | acoA | DM42_3262 | DM42_3261 | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | ABC transporter substrate-binding protein; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | 0.999 |
| acoB | acoC | DM42_3262 | DM42_3263 | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | annotation not available | 0.995 |
| acoB | gcvH | DM42_3262 | DM42_1633 | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | gcvH: glycine cleavage system H protein | 0.689 |
| acoB | sucB | DM42_3262 | DM42_188 | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | Dihydrolipoyllysine-residue succinyltransferase, e2 component of oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2) | 0.951 |
page 1 of 4
