STRINGSTRING
WL94_31780 protein (Burkholderia cepacia) - STRING interaction network
"WL94_31780" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_31780annotation not available (166 aa)    
Predicted Functional Partners:
WL94_31775
annotation not available (518 aa)
 
     
  0.887
WL94_31770
annotation not available (277 aa)
              0.721
DM42_4661
annotation not available (156 aa)
    
          0.615
WI67_12030
cueR- Cu(I)-responsive transcriptional regulator (134 aa)
    
          0.595
DM42_6833
annotation not available (128 aa)
    
          0.552
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (420 aa)
         
  0.546
DM42_4609
annotation not available (130 aa)
    
          0.530
WI67_00720
cadR-PbrR- Cd(II)/Pb(II)-responsive transcriptional regulator (143 aa)
    
          0.499
rpmE
L31- ribosomal protein L31 (86 aa)
              0.453
DM42_6686
Conserved hypothetical protein (64 aa)
   
 
  0.409
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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