node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_3274 | dnaX | DM42_3274 | DM42_3273 | Dna-binding protein, ybab/ebfc family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection | dnaX_nterm: DNA polymerase III, subunit gamma and tau | 0.844 |
DM42_3274 | recR | DM42_3274 | DM42_3275 | Dna-binding protein, ybab/ebfc family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection | Recombination protein recr; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO | 0.976 |
dnaG | dnaX | DM42_4170 | DM42_3273 | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | dnaX_nterm: DNA polymerase III, subunit gamma and tau | 0.864 |
dnaG | recG | DM42_4170 | DM42_1117 | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | Atp-dependent dna helicase recg; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA) | 0.515 |
dnaG | recO | DM42_4170 | DM42_690 | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | Dna repair protein reco (recombination protein o); Involved in DNA repair and RecF pathway recombination | 0.507 |
dnaG | recR | DM42_4170 | DM42_3275 | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | Recombination protein recr; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO | 0.898 |
dnaG | ruvA | DM42_4170 | DM42_1153 | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB | 0.568 |
dnaG | ruvB | DM42_4170 | DM42_1154 | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing | 0.546 |
dnaX | DM42_3274 | DM42_3273 | DM42_3274 | dnaX_nterm: DNA polymerase III, subunit gamma and tau | Dna-binding protein, ybab/ebfc family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection | 0.844 |
dnaX | dnaG | DM42_3273 | DM42_4170 | dnaX_nterm: DNA polymerase III, subunit gamma and tau | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | 0.864 |
dnaX | recD | DM42_3273 | DM42_505 | dnaX_nterm: DNA polymerase III, subunit gamma and tau | recD: exodeoxyribonuclease V, alpha subunit | 0.534 |
dnaX | recG | DM42_3273 | DM42_1117 | dnaX_nterm: DNA polymerase III, subunit gamma and tau | Atp-dependent dna helicase recg; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA) | 0.763 |
dnaX | recN | DM42_3273 | DM42_1094 | dnaX_nterm: DNA polymerase III, subunit gamma and tau | Dna repair protein recn (recombination protein n); May be involved in recombinational repair of damaged DNA | 0.629 |
dnaX | recO | DM42_3273 | DM42_690 | dnaX_nterm: DNA polymerase III, subunit gamma and tau | Dna repair protein reco (recombination protein o); Involved in DNA repair and RecF pathway recombination | 0.829 |
dnaX | recR | DM42_3273 | DM42_3275 | dnaX_nterm: DNA polymerase III, subunit gamma and tau | Recombination protein recr; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO | 0.914 |
dnaX | ruvA | DM42_3273 | DM42_1153 | dnaX_nterm: DNA polymerase III, subunit gamma and tau | The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB | 0.411 |
dnaX | ruvB | DM42_3273 | DM42_1154 | dnaX_nterm: DNA polymerase III, subunit gamma and tau | The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing | 0.554 |
recD | dnaX | DM42_505 | DM42_3273 | recD: exodeoxyribonuclease V, alpha subunit | dnaX_nterm: DNA polymerase III, subunit gamma and tau | 0.534 |
recD | recG | DM42_505 | DM42_1117 | recD: exodeoxyribonuclease V, alpha subunit | Atp-dependent dna helicase recg; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA) | 0.650 |
recD | recN | DM42_505 | DM42_1094 | recD: exodeoxyribonuclease V, alpha subunit | Dna repair protein recn (recombination protein n); May be involved in recombinational repair of damaged DNA | 0.499 |