STRINGSTRING
WL94_31840 protein (Burkholderia cepacia) - STRING interaction network
"WL94_31840" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_31840annotation not available (284 aa)    
Predicted Functional Partners:
WI67_17815
Uncharacterized protein (65 aa)
   
          0.611
WL94_22215
annotation not available (288 aa)
 
          0.589
nagE
PTS N-acetyl-D-glucosamine transporter; PTS-II-BC-nag- PTS system, N-acetylglucosamine-specific IIBC component (588 aa)
         
  0.576
WI67_00425
annotation not available (136 aa)
   
          0.546
DM42_7152
Conserved hypothetical protein (125 aa)
   
          0.538
WI67_28895
DUF1488 domain-containing protein (95 aa)
   
          0.536
DM42_3029
annotation not available (118 aa)
   
          0.534
rumA
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA (465 aa)
              0.508
WL94_29795
annotation not available (143 aa)
   
          0.504
DM42_3108
annotation not available (202 aa)
   
          0.494
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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