Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| WI67_09690 | cysM | DM42_3281 | DM42_772 | annotation not available | cysM- cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family | 0.421 |
| WI67_09690 | rumA | DM42_3281 | DM42_3283 | annotation not available | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA | 0.767 |
| WL94_04105 | ftsJ | DM42_2558 | DM42_425 | annotation not available | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | 0.834 |
| WL94_04105 | guaA | DM42_2558 | DM42_3109 | annotation not available | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | 0.677 |
| WL94_04105 | ksgA | DM42_2558 | DM42_2364 | annotation not available | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | 0.786 |
| WL94_04105 | rumA | DM42_2558 | DM42_3283 | annotation not available | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA | 0.737 |
| cysM | WI67_09690 | DM42_772 | DM42_3281 | cysM- cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family | annotation not available | 0.421 |
| cysM | guaA | DM42_772 | DM42_3109 | cysM- cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | 0.678 |
| cysM | rumA | DM42_772 | DM42_3283 | cysM- cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA | 0.630 |
| ftsJ | WL94_04105 | DM42_425 | DM42_2558 | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | annotation not available | 0.834 |
| ftsJ | guaA | DM42_425 | DM42_3109 | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | 0.838 |
| ftsJ | ksgA | DM42_425 | DM42_2364 | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | 0.913 |
| ftsJ | rimM | DM42_425 | DM42_757 | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family | 0.484 |
| ftsJ | rumA | DM42_425 | DM42_3283 | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA | 0.677 |
| ftsJ | sun | DM42_425 | DM42_1887 | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | 16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA | 0.818 |
| guaA | WL94_04105 | DM42_3109 | DM42_2558 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | annotation not available | 0.677 |
| guaA | cysM | DM42_3109 | DM42_772 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | cysM- cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family | 0.678 |
| guaA | ftsJ | DM42_3109 | DM42_425 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit | 0.838 |
| guaA | ksgA | DM42_3109 | DM42_2364 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | 0.589 |
| guaA | nnrD | DM42_3109 | DM42_3184 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family | 0.480 |
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