Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| WL94_31880 | bamE | DM42_3290 | DM42_1193 | annotation not available | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.659 |
| WL94_31880 | engA | DM42_3290 | DM42_3292 | annotation not available | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis | 0.721 |
| WL94_31880 | ftsQ | DM42_3290 | DM42_1277 | annotation not available | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly | 0.677 |
| WL94_31880 | hisS | DM42_3290 | DM42_3289 | annotation not available | hisS- histidine--tRNA ligase | 0.906 |
| WL94_31880 | holA | DM42_3290 | DM42_1187 | annotation not available | holA- DNA polymerase III, delta subunit | 0.707 |
| WL94_31880 | ispG | DM42_3290 | DM42_3288 | annotation not available | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family | 0.788 |
| WL94_31880 | lptF | DM42_3290 | DM42_2601 | annotation not available | annotation not available | 0.656 |
| WL94_31880 | mreD | DM42_3290 | DM42_1899 | annotation not available | shape_MreD- rod shape-determining protein MreD | 0.662 |
| WL94_31880 | recO | DM42_3290 | DM42_690 | annotation not available | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination | 0.701 |
| WL94_31880 | yfgL | DM42_3290 | DM42_3291 | annotation not available | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.947 |
| bamE | WL94_31880 | DM42_1193 | DM42_3290 | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | annotation not available | 0.659 |
| bamE | ftsQ | DM42_1193 | DM42_1277 | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly | 0.595 |
| bamE | holA | DM42_1193 | DM42_1187 | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | holA- DNA polymerase III, delta subunit | 0.802 |
| bamE | lptF | DM42_1193 | DM42_2601 | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | annotation not available | 0.619 |
| bamE | recO | DM42_1193 | DM42_690 | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination | 0.547 |
| bamE | yfgL | DM42_1193 | DM42_3291 | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.885 |
| engA | WL94_31880 | DM42_3292 | DM42_3290 | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis | annotation not available | 0.721 |
| engA | hisS | DM42_3292 | DM42_3289 | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis | hisS- histidine--tRNA ligase | 0.923 |
| engA | ispG | DM42_3292 | DM42_3288 | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family | 0.584 |
| engA | yfgL | DM42_3292 | DM42_3291 | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.919 |
page 1 of 4
