Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM42_1108 | DM42_3184 | DM42_1108 | DM42_3184 | Plp dependent protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis | annotation not available | 0.556 |
| DM42_1108 | DM42_893 | DM42_1108 | DM42_893 | Plp dependent protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis | annotation not available | 0.675 |
| DM42_1108 | ftsZ | DM42_1108 | DM42_1275 | Plp dependent protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis | Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity | 0.445 |
| DM42_1108 | pgeF | DM42_1108 | DM42_3310 | Plp dependent protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis | Multi-copper polyphenol oxidoreductase laccase family protein; Belongs to the multicopper oxidase YfiH/RL5 family | 0.638 |
| DM42_3184 | DM42_1108 | DM42_3184 | DM42_1108 | annotation not available | Plp dependent protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis | 0.556 |
| DM42_3184 | ftsZ | DM42_3184 | DM42_1275 | annotation not available | Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity | 0.427 |
| DM42_3184 | pgeF | DM42_3184 | DM42_3310 | annotation not available | Multi-copper polyphenol oxidoreductase laccase family protein; Belongs to the multicopper oxidase YfiH/RL5 family | 0.569 |
| DM42_3184 | preA | DM42_3184 | DM42_7359 | annotation not available | Dihydropyrimidine dehydrogenase (nad+) subunit prea; pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein | 0.566 |
| DM42_3309 | pgeF | DM42_3309 | DM42_3310 | 23S rRNA pseudouridine1911/1915/1917 synthase; Belongs to the pseudouridine synthase RluA family | Multi-copper polyphenol oxidoreductase laccase family protein; Belongs to the multicopper oxidase YfiH/RL5 family | 0.962 |
| DM42_3309 | phbC | DM42_3309 | DM42_3311 | 23S rRNA pseudouridine1911/1915/1917 synthase; Belongs to the pseudouridine synthase RluA family | annotation not available | 0.475 |
| DM42_3309 | rimO | DM42_3309 | DM42_3405 | 23S rRNA pseudouridine1911/1915/1917 synthase; Belongs to the pseudouridine synthase RluA family | Ribosomal protein s12 methylthiotransferase rimo; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 | 0.539 |
| DM42_3309 | yfiO | DM42_3309 | DM42_3308 | 23S rRNA pseudouridine1911/1915/1917 synthase; Belongs to the pseudouridine synthase RluA family | Outer membrane assembly lipoyfio family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.732 |
| DM42_893 | DM42_1108 | DM42_893 | DM42_1108 | annotation not available | Plp dependent protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis | 0.675 |
| DM42_893 | pgeF | DM42_893 | DM42_3310 | annotation not available | Multi-copper polyphenol oxidoreductase laccase family protein; Belongs to the multicopper oxidase YfiH/RL5 family | 0.477 |
| amt | pgeF | DM42_2204 | DM42_3310 | Amt: ammonium transporter family protein | Multi-copper polyphenol oxidoreductase laccase family protein; Belongs to the multicopper oxidase YfiH/RL5 family | 0.614 |
| ftsZ | DM42_1108 | DM42_1275 | DM42_1108 | Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity | Plp dependent protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis | 0.445 |
| ftsZ | DM42_3184 | DM42_1275 | DM42_3184 | Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity | annotation not available | 0.427 |
| ftsZ | pgeF | DM42_1275 | DM42_3310 | Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity | Multi-copper polyphenol oxidoreductase laccase family protein; Belongs to the multicopper oxidase YfiH/RL5 family | 0.766 |
| ftsZ | yfiO | DM42_1275 | DM42_3308 | Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity | Outer membrane assembly lipoyfio family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.414 |
| pgeF | DM42_1108 | DM42_3310 | DM42_1108 | Multi-copper polyphenol oxidoreductase laccase family protein; Belongs to the multicopper oxidase YfiH/RL5 family | Plp dependent protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis | 0.638 |
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