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DM42_3433 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3433" - papC N-terminal domain protein in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3433papC N-terminal domain protein (816 aa)    
Predicted Functional Partners:
DM42_3434
Conserved hypothetical protein (245 aa)
 
 
  0.976
DM42_3435
Conserved hypothetical protein (226 aa)
 
 
  0.941
WL94_28930
Fimbrial protein; Pili assembly chaperone PapD, C-terminal domain protein (248 aa)
 
 
  0.832
DM42_6254
Pili assembly chaperone PapD, C-terminal domain protein (255 aa)
 
 
  0.787
fimA
annotation not available (170 aa)
 
 
  0.764
DM42_6253
annotation not available (184 aa)
 
 
  0.738
DM42_393
Conserved hypothetical protein (580 aa)
 
     
  0.688
DM42_6256
annotation not available (312 aa)
 
 
  0.678
DM42_4746
annotation not available (196 aa)
   
          0.649
DM42_70
annotation not available (341 aa)
 
 
  0.627
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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