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DM42_3435 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3435" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3435Conserved hypothetical protein (226 aa)    
Predicted Functional Partners:
DM42_3434
Conserved hypothetical protein (245 aa)
 
 
  0.943
DM42_3433
papC N-terminal domain protein (816 aa)
 
 
  0.941
DM42_393
Conserved hypothetical protein (580 aa)
   
     
  0.773
DM42_4749
annotation not available (73 aa)
   
          0.732
DM42_3599
annotation not available (292 aa)
   
     
  0.717
DM42_5064
Conserved hypothetical protein (332 aa)
   
          0.714
DM42_4746
annotation not available (196 aa)
   
          0.689
DM42_6318
annotation not available (408 aa)
   
          0.686
WL94_10950
annotation not available (317 aa)
   
          0.682
WL94_28925
papC N-terminal domain protein (817 aa)
 
 
  0.657
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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