Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1527 | DM42_1528 | DM42_1527 | DM42_1528 | annotation not available | annotation not available | 0.975 |
DM42_1527 | DM42_3449 | DM42_1527 | DM42_3449 | annotation not available | outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | 0.607 |
DM42_1527 | DM42_3451 | DM42_1527 | DM42_3451 | annotation not available | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.636 |
DM42_1527 | DM42_7397 | DM42_1527 | DM42_7397 | annotation not available | annotation not available | 0.636 |
DM42_1527 | MexA | DM42_1527 | DM42_2460 | annotation not available | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.636 |
DM42_1527 | acrA | DM42_1527 | DM42_7280 | annotation not available | annotation not available | 0.636 |
DM42_1527 | ceoA | DM42_1527 | DM42_5422 | annotation not available | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.636 |
DM42_1527 | macB | DM42_1527 | DM42_5807 | annotation not available | Macrolide transport system atp-binding/permease protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides | 0.516 |
DM42_1528 | DM42_1527 | DM42_1528 | DM42_1527 | annotation not available | annotation not available | 0.975 |
DM42_1528 | DM42_3449 | DM42_1528 | DM42_3449 | annotation not available | outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | 0.607 |
DM42_1528 | DM42_3451 | DM42_1528 | DM42_3451 | annotation not available | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.636 |
DM42_1528 | DM42_7397 | DM42_1528 | DM42_7397 | annotation not available | annotation not available | 0.636 |
DM42_1528 | MexA | DM42_1528 | DM42_2460 | annotation not available | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.636 |
DM42_1528 | acrA | DM42_1528 | DM42_7280 | annotation not available | annotation not available | 0.636 |
DM42_1528 | ceoA | DM42_1528 | DM42_5422 | annotation not available | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.636 |
DM42_1528 | macB | DM42_1528 | DM42_5807 | annotation not available | Macrolide transport system atp-binding/permease protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides | 0.493 |
DM42_3449 | DM42_1527 | DM42_3449 | DM42_1527 | outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | annotation not available | 0.607 |
DM42_3449 | DM42_1528 | DM42_3449 | DM42_1528 | outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | annotation not available | 0.607 |
DM42_3449 | DM42_3450 | DM42_3449 | DM42_3450 | outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | Acrb/acrd/acrf family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family | 0.933 |
DM42_3449 | DM42_3451 | DM42_3449 | DM42_3451 | outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.948 |
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