STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ghrBannotation not available (321 aa)    
Predicted Functional Partners:
WI67_09990
Tartro_sem_red: 2-hydroxy-3-oxopropionate reductase
 
 
 0.920
WI67_03085
Gluconokinase; Therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family protein
  
 
 0.915
gloA
glyox_I: lactoylglutathione lyase
  
 0.912
hyi
OH-pyruv-isom: hydroxypyruvate isomerase; Belongs to the hyi family
  
 
 0.912
aceB
malate_syn_A: malate synthase A; Belongs to the malate synthase family
   
 
 0.909
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily
   
 
 0.909
DM42_5386
annotation not available
 
 
  0.909
eda
Eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein
    
 0.907
aceA
Isocit_lyase: isocitrate lyase
     
 0.906
gcl
Glyox_carbo_lig: glyoxylate carboligase; Belongs to the TPP enzyme family
     
 0.906
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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