DM42_3462 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

DM42_3462

Hypothetical protein; Uncharacterized protein (120 aa)

Predicted Functional Partners:

DM42_3461

0.918

DM42_3145

0.784

DM42_3147

0.784

DM42_3412

0.784

DM42_3631

0.784

DM42_5139

0.784

DM42_5275

0.784

DM42_5470

0.784

DM42_561

0.784

DM42_98

0.784

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
DM42_3145	DM42_3147	Hypothetical protein; Uncharacterized protein	annotation not available	0.833
DM42_3145	DM42_3412	Hypothetical protein; Uncharacterized protein	annotation not available	0.782
DM42_3145	DM42_3461	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.480
DM42_3145	DM42_3462	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.784
DM42_3145	DM42_3631	Hypothetical protein; Uncharacterized protein	Conserved hypothetical protein	0.782
DM42_3145	DM42_5139	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Serine/threonine protein kinase	0.784
DM42_3145	DM42_5275	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.784
DM42_3145	DM42_5470	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.782
DM42_3145	DM42_561	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.785
DM42_3145	DM42_98	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.784
DM42_3147	DM42_3145	annotation not available	Hypothetical protein; Uncharacterized protein	0.833
DM42_3147	DM42_3412	annotation not available	annotation not available	0.784
DM42_3147	DM42_3461	annotation not available	Hypothetical protein; Uncharacterized protein	0.556
DM42_3147	DM42_3462	annotation not available	Hypothetical protein; Uncharacterized protein	0.784
DM42_3147	DM42_3631	annotation not available	Conserved hypothetical protein	0.784
DM42_3147	DM42_5139	annotation not available	Hypothetical protein; Serine/threonine protein kinase	0.784
DM42_3147	DM42_5275	annotation not available	Hypothetical protein; Uncharacterized protein	0.784
DM42_3147	DM42_5470	annotation not available	Hypothetical protein; Uncharacterized protein	0.783
DM42_3147	DM42_561	annotation not available	Hypothetical protein; Uncharacterized protein	0.784
DM42_3147	DM42_98	annotation not available	Hypothetical protein; Uncharacterized protein	0.784

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