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DM42_3468 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3468" - cyd_oper_ybgT: cyd operon protein YbgT in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3468cyd_oper_ybgT- cyd operon protein YbgT (48 aa)    
Predicted Functional Partners:
WI67_09185
annotation not available (205 aa)
              0.845
WI67_15075
Cytochrome bd-I oxidase subunit CydX; cyd_oper_ybgT- cyd operon protein YbgT (40 aa)
   
   
 
0.810
WI67_15070
cydB- cytochrome d ubiquinol oxidase, subunit II (378 aa)
 
 
  0.591
DM42_5573
annotation not available (262 aa)
   
          0.535
WL94_31280
annotation not available (381 aa)
   
          0.534
WL94_36865
cydB- cytochrome d ubiquinol oxidase, subunit II (335 aa)
   
 
  0.529
WI67_31460
cydB- cytochrome d ubiquinol oxidase, subunit II (335 aa)
   
 
  0.529
corA
Magnesium transport protein CorA; Mediates influx of magnesium ions (325 aa)
              0.526
cydA
annotation not available (526 aa)
 
 
 
  0.509
DM42_2695
annotation not available (98 aa)
   
          0.480
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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