• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
DM42_3476 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3476" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3476annotation not available (388 aa)    
Predicted Functional Partners:
WI67_09140
annotation not available (143 aa)
 
 
      0.926
WI67_09150
annotation not available (301 aa)
 
     
  0.854
WI67_09155
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (233 aa)
 
     
  0.842
DM42_3478
annotation not available (941 aa)
 
     
  0.810
WI67_09145
annotation not available (140 aa)
 
 
      0.784
DM42_3484
annotation not available (906 aa)
   
     
  0.745
DM42_4810
Primase C terminal 2 family protein (615 aa)
   
     
  0.662
DM42_4936
annotation not available (311 aa)
   
        0.637
WL94_05590
annotation not available (288 aa)
   
          0.618
DM42_4939
acyl-CoA dehydrogenase, C-terminal domain protein (371 aa)
   
          0.599
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (15%) [HD]