STRINGSTRING
DM42_3479 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3479" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3479annotation not available (624 aa)    
Predicted Functional Partners:
WL94_29685
annotation not available (350 aa)
 
   
  0.968
WL94_29680
annotation not available (367 aa)
 
   
  0.966
WL94_29675
Microcin ABC transporter ATP-binding protein; nickel_nikE- nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily (540 aa)
 
   
  0.938
WL94_39485
annotation not available (347 aa)
 
   
  0.828
WL94_39480
annotation not available (365 aa)
 
   
  0.821
WL94_39490
annotation not available (624 aa)
   
   
 
0.808
WL94_39475
Microcin ABC transporter ATP-binding protein; nickel_nikE- nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily (540 aa)
 
   
  0.696
WL94_29660
2A0602- RND transporter, hydrophobe/amphiphile efflux-1 family protein (1057 aa)
   
        0.554
DM42_3478
annotation not available (941 aa)
   
        0.482
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (917 aa)
     
      0.480
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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