Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1379 | DM42_3535 | DM42_1379 | DM42_3535 | Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis | annotation not available | 0.552 |
DM42_1379 | petA | DM42_1379 | DM42_1380 | Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis | 0.999 |
DM42_3255 | DM42_3535 | DM42_3255 | DM42_3535 | annotation not available | annotation not available | 0.709 |
DM42_3533 | DM42_3534 | DM42_3533 | DM42_3534 | annotation not available | annotation not available | 0.980 |
DM42_3533 | DM42_3535 | DM42_3533 | DM42_3535 | annotation not available | annotation not available | 0.953 |
DM42_3534 | DM42_3533 | DM42_3534 | DM42_3533 | annotation not available | annotation not available | 0.980 |
DM42_3534 | DM42_3535 | DM42_3534 | DM42_3535 | annotation not available | annotation not available | 0.915 |
DM42_3535 | DM42_1379 | DM42_3535 | DM42_1379 | annotation not available | Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis | 0.552 |
DM42_3535 | DM42_3255 | DM42_3535 | DM42_3255 | annotation not available | annotation not available | 0.709 |
DM42_3535 | DM42_3533 | DM42_3535 | DM42_3533 | annotation not available | annotation not available | 0.953 |
DM42_3535 | DM42_3534 | DM42_3535 | DM42_3534 | annotation not available | annotation not available | 0.915 |
DM42_3535 | DM42_3730 | DM42_3535 | DM42_3730 | annotation not available | annotation not available | 0.633 |
DM42_3535 | DM42_3731 | DM42_3535 | DM42_3731 | annotation not available | annotation not available | 0.647 |
DM42_3535 | DM42_6272 | DM42_3535 | DM42_6272 | annotation not available | Sulfite reductase (nadph) flavoprotein alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily | 0.535 |
DM42_3535 | DM42_773 | DM42_3535 | DM42_773 | annotation not available | annotation not available | 0.709 |
DM42_3535 | kstD | DM42_3535 | DM42_6312 | annotation not available | annotation not available | 0.579 |
DM42_3535 | petA | DM42_3535 | DM42_1380 | annotation not available | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis | 0.526 |
DM42_3730 | DM42_3535 | DM42_3730 | DM42_3535 | annotation not available | annotation not available | 0.633 |
DM42_3730 | DM42_3731 | DM42_3730 | DM42_3731 | annotation not available | annotation not available | 0.999 |
DM42_3731 | DM42_3535 | DM42_3731 | DM42_3535 | annotation not available | annotation not available | 0.647 |
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