STRINGSTRING
DM42_3538 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3538" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3538annotation not available (393 aa)    
Predicted Functional Partners:
DM42_2153
Uncharacterized protein (107 aa)
   
          0.756
WI67_09765
annotation not available (585 aa)
   
          0.719
WI67_21510
annotation not available (269 aa)
   
          0.714
WL94_24175
annotation not available (170 aa)
   
          0.711
VL15_35285
annotation not available (91 aa)
   
          0.698
WI67_21820
Uncharacterized protein (170 aa)
   
          0.673
DM42_2162
Conserved hypothetical protein (247 aa)
   
          0.668
WL94_31950
Uncharacterized protein (250 aa)
   
 
      0.664
WI67_16665
annotation not available (126 aa)
   
          0.664
WL94_20075
Uncharacterized protein (235 aa)
   
          0.656
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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