STRINGSTRING
DM42_3568 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3568" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3568annotation not available (242 aa)    
Predicted Functional Partners:
DM42_7390
annotation not available (4558 aa)
 
     
  0.703
DM42_6816
annotation not available (4237 aa)
   
          0.695
DM42_5853
T1SS_VCA0849- type I secretion C-terminal target domain protein (2134 aa)
   
     
  0.688
DM42_4347
Conserved hypothetical protein (139 aa)
   
          0.685
DM42_7367
annotation not available (199 aa)
   
          0.669
WL94_38795
annotation not available (523 aa)
   
          0.659
DM42_6817
annotation not available (1103 aa)
   
          0.646
DM42_5854
annotation not available (508 aa)
   
          0.628
DM42_979
annotation not available (990 aa)
   
          0.599
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (917 aa)
         
  0.597
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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