Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM42_2977 | DM42_3703 | DM42_2977 | DM42_3703 | comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 | annotation not available | 0.645 |
| DM42_2977 | WI67_04835 | DM42_2977 | DM42_827 | comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 | Dnaq- exonuclease, DNA polymerase III, epsilon subunit family domain protein | 0.793 |
| DM42_2977 | WL94_11455 | DM42_2977 | DM42_3574 | comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 | annotation not available | 0.508 |
| DM42_2977 | holA | DM42_2977 | DM42_1187 | comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 | holA- DNA polymerase III, delta subunit | 0.743 |
| DM42_2977 | ligA | DM42_2977 | DM42_3074 | comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily | 0.538 |
| DM42_2977 | polA | DM42_2977 | DM42_4183 | comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity | 0.802 |
| DM42_3703 | DM42_2977 | DM42_3703 | DM42_2977 | annotation not available | comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 | 0.645 |
| DM42_3703 | WL94_11455 | DM42_3703 | DM42_3574 | annotation not available | annotation not available | 0.534 |
| WI67_04835 | DM42_2977 | DM42_827 | DM42_2977 | Dnaq- exonuclease, DNA polymerase III, epsilon subunit family domain protein | comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 | 0.793 |
| WI67_04835 | WL94_11455 | DM42_827 | DM42_3574 | Dnaq- exonuclease, DNA polymerase III, epsilon subunit family domain protein | annotation not available | 0.615 |
| WI67_04835 | dnaN | DM42_827 | DM42_1785 | Dnaq- exonuclease, DNA polymerase III, epsilon subunit family domain protein | Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] | 0.963 |
| WI67_04835 | dnaX | DM42_827 | DM42_3273 | Dnaq- exonuclease, DNA polymerase III, epsilon subunit family domain protein | dnaX_nterm- DNA polymerase III, subunit gamma and tau | 0.961 |
| WI67_04835 | holA | DM42_827 | DM42_1187 | Dnaq- exonuclease, DNA polymerase III, epsilon subunit family domain protein | holA- DNA polymerase III, delta subunit | 0.867 |
| WI67_04835 | ligA | DM42_827 | DM42_3074 | Dnaq- exonuclease, DNA polymerase III, epsilon subunit family domain protein | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily | 0.742 |
| WI67_04835 | polA | DM42_827 | DM42_4183 | Dnaq- exonuclease, DNA polymerase III, epsilon subunit family domain protein | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity | 0.968 |
| WI67_24280 | WL94_11450 | DM42_3575 | DM42_3573 | annotation not available | annotation not available | 0.584 |
| WI67_24280 | WL94_11455 | DM42_3575 | DM42_3574 | annotation not available | annotation not available | 0.584 |
| WL94_11450 | WI67_24280 | DM42_3573 | DM42_3575 | annotation not available | annotation not available | 0.584 |
| WL94_11450 | WL94_11455 | DM42_3573 | DM42_3574 | annotation not available | annotation not available | 0.976 |
| WL94_11450 | dnaN | DM42_3573 | DM42_1785 | annotation not available | Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] | 0.466 |
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