Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DM42_2977 | DM42_3057 | DM42_2977 | DM42_3057 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | Uncharacterized protein | 0.622 |
| DM42_2977 | DM42_3574 | DM42_2977 | DM42_3574 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | Vrr-nuc domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions | 0.508 |
| DM42_2977 | DM42_3703 | DM42_2977 | DM42_3703 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | annotation not available | 0.423 |
| DM42_2977 | DM42_827 | DM42_2977 | DM42_827 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | Dnaq: exonuclease, DNA polymerase III, epsilon subunit family domain protein | 0.685 |
| DM42_2977 | holA | DM42_2977 | DM42_1187 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | holA: DNA polymerase III, delta subunit | 0.766 |
| DM42_2977 | polA | DM42_2977 | DM42_4183 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.509 |
| DM42_3057 | DM42_2977 | DM42_3057 | DM42_2977 | Uncharacterized protein | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | 0.622 |
| DM42_3057 | DM42_3574 | DM42_3057 | DM42_3574 | Uncharacterized protein | Vrr-nuc domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions | 0.485 |
| DM42_3573 | DM42_3574 | DM42_3573 | DM42_3574 | annotation not available | Vrr-nuc domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions | 0.975 |
| DM42_3573 | DM42_3575 | DM42_3573 | DM42_3575 | annotation not available | annotation not available | 0.584 |
| DM42_3573 | DM42_827 | DM42_3573 | DM42_827 | annotation not available | Dnaq: exonuclease, DNA polymerase III, epsilon subunit family domain protein | 0.420 |
| DM42_3573 | dnaN | DM42_3573 | DM42_1785 | annotation not available | Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for proces [...] | 0.735 |
| DM42_3573 | polA | DM42_3573 | DM42_4183 | annotation not available | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.937 |
| DM42_3574 | DM42_2977 | DM42_3574 | DM42_2977 | Vrr-nuc domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 | 0.508 |
| DM42_3574 | DM42_3057 | DM42_3574 | DM42_3057 | Vrr-nuc domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions | Uncharacterized protein | 0.485 |
| DM42_3574 | DM42_3573 | DM42_3574 | DM42_3573 | Vrr-nuc domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions | annotation not available | 0.975 |
| DM42_3574 | DM42_3575 | DM42_3574 | DM42_3575 | Vrr-nuc domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions | annotation not available | 0.584 |
| DM42_3574 | DM42_3703 | DM42_3574 | DM42_3703 | Vrr-nuc domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions | annotation not available | 0.534 |
| DM42_3574 | DM42_827 | DM42_3574 | DM42_827 | Vrr-nuc domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions | Dnaq: exonuclease, DNA polymerase III, epsilon subunit family domain protein | 0.648 |
| DM42_3574 | dnaN | DM42_3574 | DM42_1785 | Vrr-nuc domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions | Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for proces [...] | 0.492 |
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