DM42_3575 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

DM42_3575

annotation not available (293 aa)

Predicted Functional Partners:

DM42_5827

0.730

DM42_1517

0.711

DM42_2983

0.707

DM42_5786

0.694

DM42_2685

0.690

DM42_7152

0.668

DM42_263

0.619

DM42_5083

0.608

DM42_5643

0.602

DM42_3573

0.584

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
DM42_1517	DM42_263	Hypothetical protein; Uncharacterized protein	annotation not available	0.678
DM42_1517	DM42_2685	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.694
DM42_1517	DM42_2983	Hypothetical protein; Uncharacterized protein	annotation not available	0.715
DM42_1517	DM42_3575	Hypothetical protein; Uncharacterized protein	annotation not available	0.711
DM42_1517	DM42_5083	Hypothetical protein; Uncharacterized protein	Conserved hypothetical protein	0.710
DM42_1517	DM42_5786	Hypothetical protein; Uncharacterized protein	Hypothetical protein; DUF1488 domain-containing protein	0.628
DM42_1517	DM42_5827	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.512
DM42_1517	DM42_7152	Hypothetical protein; Uncharacterized protein	Conserved hypothetical protein	0.581
DM42_263	DM42_1517	annotation not available	Hypothetical protein; Uncharacterized protein	0.678
DM42_263	DM42_2685	annotation not available	Hypothetical protein; Uncharacterized protein	0.449
DM42_263	DM42_2983	annotation not available	annotation not available	0.534
DM42_263	DM42_3575	annotation not available	annotation not available	0.619
DM42_263	DM42_5083	annotation not available	Conserved hypothetical protein	0.741
DM42_263	DM42_5643	annotation not available	Hypothetical protein; Uncharacterized protein	0.554
DM42_263	DM42_5786	annotation not available	Hypothetical protein; DUF1488 domain-containing protein	0.457
DM42_2685	DM42_1517	Hypothetical protein; Uncharacterized protein	Hypothetical protein; Uncharacterized protein	0.694
DM42_2685	DM42_263	Hypothetical protein; Uncharacterized protein	annotation not available	0.449
DM42_2685	DM42_2983	Hypothetical protein; Uncharacterized protein	annotation not available	0.661
DM42_2685	DM42_3575	Hypothetical protein; Uncharacterized protein	annotation not available	0.690
DM42_2685	DM42_5083	Hypothetical protein; Uncharacterized protein	Conserved hypothetical protein	0.660

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