Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_3582 | DM42_3583 | DM42_3582 | DM42_3583 | Putative membrane protein; Conserved hypothetical protein | Conserved hypothetical protein | 0.810 |
DM42_3582 | DM42_3584 | DM42_3582 | DM42_3584 | Putative membrane protein; Conserved hypothetical protein | annotation not available | 0.562 |
DM42_3582 | DM42_3585 | DM42_3582 | DM42_3585 | Putative membrane protein; Conserved hypothetical protein | annotation not available | 0.471 |
DM42_3582 | DM42_485 | DM42_3582 | DM42_485 | Putative membrane protein; Conserved hypothetical protein | TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence domain protein | 0.596 |
DM42_3582 | DM42_6719 | DM42_3582 | DM42_6719 | Putative membrane protein; Conserved hypothetical protein | annotation not available | 0.624 |
DM42_3582 | DM42_6985 | DM42_3582 | DM42_6985 | Putative membrane protein; Conserved hypothetical protein | annotation not available | 0.629 |
DM42_3582 | DM42_7121 | DM42_3582 | DM42_7121 | Putative membrane protein; Conserved hypothetical protein | annotation not available | 0.557 |
DM42_3582 | DM42_7322 | DM42_3582 | DM42_7322 | Putative membrane protein; Conserved hypothetical protein | annotation not available | 0.513 |
DM42_3582 | ku | DM42_3582 | DM42_7099 | Putative membrane protein; Conserved hypothetical protein | Dna end-binding protein ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD | 0.507 |
DM42_3582 | ligD | DM42_3582 | DM42_7098 | Putative membrane protein; Conserved hypothetical protein | Bifunctional non-homologous end joining protein ligd; NHEJ_ligase_prk: DNA ligase D | 0.635 |
DM42_3583 | DM42_3582 | DM42_3583 | DM42_3582 | Conserved hypothetical protein | Putative membrane protein; Conserved hypothetical protein | 0.810 |
DM42_3583 | DM42_3584 | DM42_3583 | DM42_3584 | Conserved hypothetical protein | annotation not available | 0.731 |
DM42_3583 | DM42_3585 | DM42_3583 | DM42_3585 | Conserved hypothetical protein | annotation not available | 0.546 |
DM42_3584 | DM42_3582 | DM42_3584 | DM42_3582 | annotation not available | Putative membrane protein; Conserved hypothetical protein | 0.562 |
DM42_3584 | DM42_3583 | DM42_3584 | DM42_3583 | annotation not available | Conserved hypothetical protein | 0.731 |
DM42_3584 | DM42_3585 | DM42_3584 | DM42_3585 | annotation not available | annotation not available | 0.643 |
DM42_3585 | DM42_3582 | DM42_3585 | DM42_3582 | annotation not available | Putative membrane protein; Conserved hypothetical protein | 0.471 |
DM42_3585 | DM42_3583 | DM42_3585 | DM42_3583 | annotation not available | Conserved hypothetical protein | 0.546 |
DM42_3585 | DM42_3584 | DM42_3585 | DM42_3584 | annotation not available | annotation not available | 0.643 |
DM42_485 | DM42_3582 | DM42_485 | DM42_3582 | TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence domain protein | Putative membrane protein; Conserved hypothetical protein | 0.596 |
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