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DM42_3583 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3583" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3583Conserved hypothetical protein (181 aa)    
Predicted Functional Partners:
DM42_3582
Conserved hypothetical protein (208 aa)
 
          0.810
DM42_3584
annotation not available (136 aa)
 
          0.731
WL94_14315
annotation not available (386 aa)
   
          0.566
DM42_3496
Conserved hypothetical protein (108 aa)
   
          0.561
WL94_11370
ATPase; Plasmid replication region DNA-binding N-term family protein (339 aa)
   
          0.558
DM42_3585
annotation not available (660 aa)
 
          0.546
WI67_28870
Uncharacterized protein (95 aa)
   
          0.531
WI67_12060
Uncharacterized protein (405 aa)
   
          0.519
DM42_4397
Conserved hypothetical protein (196 aa)
   
          0.515
DM42_6223
annotation not available (108 aa)
   
          0.484
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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