Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_114 | DM42_3585 | DM42_114 | DM42_3585 | GGDEF: diguanylate cyclase domain protein | annotation not available | 0.722 |
DM42_1748 | DM42_3585 | DM42_1748 | DM42_3585 | Two-component system, ompr family, response regulator tctd; Two-component system response regulator; Transcriptional regulatory , C terminal family protein | annotation not available | 0.715 |
DM42_3584 | DM42_3585 | DM42_3584 | DM42_3585 | annotation not available | annotation not available | 0.643 |
DM42_3585 | DM42_114 | DM42_3585 | DM42_114 | annotation not available | GGDEF: diguanylate cyclase domain protein | 0.722 |
DM42_3585 | DM42_1748 | DM42_3585 | DM42_1748 | annotation not available | Two-component system, ompr family, response regulator tctd; Two-component system response regulator; Transcriptional regulatory , C terminal family protein | 0.715 |
DM42_3585 | DM42_3584 | DM42_3585 | DM42_3584 | annotation not available | annotation not available | 0.643 |
DM42_3585 | DM42_5118 | DM42_3585 | DM42_5118 | annotation not available | annotation not available | 0.563 |
DM42_3585 | DM42_6729 | DM42_3585 | DM42_6729 | annotation not available | annotation not available | 0.728 |
DM42_3585 | DM42_6829 | DM42_3585 | DM42_6829 | annotation not available | annotation not available | 0.657 |
DM42_3585 | acoB | DM42_3585 | DM42_3262 | annotation not available | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | 0.566 |
DM42_3585 | acoC | DM42_3585 | DM42_3263 | annotation not available | annotation not available | 0.579 |
DM42_3585 | bkdA2 | DM42_3585 | DM42_478 | annotation not available | annotation not available | 0.566 |
DM42_3585 | sucB | DM42_3585 | DM42_188 | annotation not available | Dihydrolipoyllysine-residue succinyltransferase, e2 component of oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2) | 0.560 |
DM42_5118 | DM42_3585 | DM42_5118 | DM42_3585 | annotation not available | annotation not available | 0.563 |
DM42_6729 | DM42_3585 | DM42_6729 | DM42_3585 | annotation not available | annotation not available | 0.728 |
DM42_6829 | DM42_3585 | DM42_6829 | DM42_3585 | annotation not available | annotation not available | 0.657 |
acoB | DM42_3585 | DM42_3262 | DM42_3585 | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | annotation not available | 0.566 |
acoB | acoC | DM42_3262 | DM42_3263 | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | annotation not available | 0.995 |
acoB | sucB | DM42_3262 | DM42_188 | Pyruvate dehydrogenase; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta | Dihydrolipoyllysine-residue succinyltransferase, e2 component of oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2) | 0.951 |
acoC | DM42_3585 | DM42_3263 | DM42_3585 | annotation not available | annotation not available | 0.579 |
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