STRINGSTRING
DM42_360 protein (Burkholderia cepacia) - STRING interaction network
"DM42_360" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_360annotation not available (461 aa)    
Predicted Functional Partners:
WI67_06620
annotation not available (241 aa)
 
  0.983
WI67_28695
Transcriptional regulatory , C terminal family protein (236 aa)
 
  0.868
DM42_7034
Transcriptional regulatory , C terminal family protein (236 aa)
 
  0.864
WL94_12880
annotation not available (248 aa)
 
 
 
  0.785
WI67_12990
Two-component system response regulator; Transcriptional regulatory , C terminal family protein (241 aa)
 
  0.761
WL94_03890
Two-component system response regulator; Transcriptional regulatory , C terminal family protein (225 aa)
 
 
 
  0.706
WL94_19540
annotation not available (589 aa)
 
     
  0.646
WI67_23570
Two-component system response regulator; Transcriptional regulatory , C terminal family protein (226 aa)
 
 
 
  0.631
WI67_28630
Two-component system response regulator; Transcriptional regulatory , C terminal family protein (220 aa)
 
 
  0.622
DM42_7279
Transcriptional regulatory , C terminal family protein (249 aa)
 
  0.613
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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