STRINGSTRING
atoE protein (Burkholderia cepacia) - STRING interaction network
"atoE" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atoEannotation not available (440 aa)    
Predicted Functional Partners:
WI67_07275
pcaJ_scoB_fam- 3-oxoacid CoA-transferase, B subunit (213 aa)
   
  0.638
WL94_10590
annotation not available (1212 aa)
           
  0.596
DM42_6496
annotation not available (465 aa)
 
        0.571
WI67_07270
pcaI_scoA_fam- 3-oxoacid CoA-transferase, A subunit (234 aa)
   
  0.567
pcaI
annotation not available (238 aa)
   
  0.563
WL94_00410
annotation not available (467 aa)
 
        0.510
pcaJ
annotation not available (218 aa)
   
  0.472
DM42_3628
annotation not available (441 aa)
              0.457
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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