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WL94_12910 protein (Burkholderia cepacia) - STRING interaction network
"WL94_12910" - tonB-siderophor: TonB-dependent siderophore receptor family protein in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_12910tonB-siderophor- TonB-dependent siderophore receptor family protein (696 aa)    
Predicted Functional Partners:
WL94_12905
annotation not available (258 aa)
 
   
  0.859
WL94_12900
annotation not available (322 aa)
 
   
  0.846
WL94_12895
annotation not available (346 aa)
 
   
  0.833
DM42_5771
annotation not available (503 aa)
 
   
  0.696
WL94_38270
Non-ribosomal peptide synthetase; AA-adenyl-dom- amino acid adenylation domain protein (1828 aa)
 
   
  0.614
DM42_339
annotation not available (327 aa)
 
   
  0.563
DM42_1618
annotation not available (156 aa)
   
          0.548
DM42_1156
annotation not available (374 aa)
   
        0.507
fcuA
annotation not available (726 aa)
 
   
  0.495
WL94_12850
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (169 aa)
   
   
  0.466
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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