STRINGSTRING
DM42_37 protein (Burkholderia cepacia) - STRING interaction network
"DM42_37" - annotation not available in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_37annotation not available (202 aa)    
Predicted Functional Partners:
DM42_38
annotation not available (365 aa)
 
  0.993
cobN
Cobalamin biosynthesis protein CobN; cobalto_cobN- cobaltochelatase, CobN subunit (1268 aa)
 
   
  0.969
cbiT
cbiT- precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit (420 aa)
 
   
  0.833
cobJ
Cobalamin biosynthesis protein CbiG; cobJ_cbiH- precorrin-3B C17-methyltransferase (571 aa)
 
        0.818
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps; Belongs to the HMBS family (334 aa)
   
   
  0.787
WL94_19430
annotation not available (466 aa)
   
 
  0.769
cobW
cobW- cobalamin biosynthesis protein CobW (362 aa)
 
        0.765
WL94_29205
annotation not available (243 aa)
 
        0.747
cobI
cobI_cbiL- precorrin-2 C20-methyltransferase (244 aa)
 
        0.723
WL94_29180
annotation not available (208 aa)
 
        0.706
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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