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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
WL94_12400 protein (Burkholderia cepacia) - STRING interaction network
"WL94_12400" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_12400annotation not available (324 aa)    
Predicted Functional Partners:
WI67_23345
Uncharacterized protein (351 aa)
          0.990
DM42_3740
annotation not available (83 aa)
 
 
 
  0.982
WL94_12395
acyl-CoA dehydrogenase, C-terminal domain protein (398 aa)
 
      0.972
DM42_3744
annotation not available (828 aa)
 
          0.969
DM42_3753
annotation not available (603 aa)
 
          0.852
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (718 aa)
   
   
  0.734
pheT
pheT_bact- phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (809 aa)