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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
amiC protein (Burkholderia cepacia) - STRING interaction network
"amiC" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amiCannotation not available (380 aa)    
Predicted Functional Partners:
WI67_23180
annotation not available (203 aa)
 
  0.981
DM42_4930
annotation not available (291 aa)
 
 
  0.952
DM42_4929
annotation not available (331 aa)
 
 
  0.937
WL94_27400
annotation not available (311 aa)
 
 
  0.920
DM42_4928
annotation not available (244 aa)
 
   
  0.900
WL94_33635
annotation not available (286 aa)
 
 
  0.894
DM42_4927
annotation not available (251 aa)
 
  0.892
DM42_285
annotation not available (409 aa)
 
 
  0.891
WL94_27415
annotation not available (234 aa)
 
  0.891
WI67_00555
annotation not available (294 aa)
 
 
  0.888
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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