STRINGSTRING
pcaH protein (Burkholderia cepacia) - STRING interaction network
"pcaH" - Protocatechuate 3,4-dioxygenase beta chain in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcaHProtocatechuate 3,4-dioxygenase beta chain; Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway (235 aa)    
Predicted Functional Partners:
pcaG
Protocatechuate 3,4-dioxygenase alpha chain; Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway (197 aa)
  0.999
pobA
Pbenz_hydroxyl- 4-hydroxybenzoate 3-monooxygenase (410 aa)
 
 
  0.989
pcaB
protocat_pcaB- 3-carboxy-cis,cis-muconate cycloisomerase (452 aa)
 
 
  0.989
pcaC
decarb_PcaC- 4-carboxymuconolactone decarboxylase (128 aa)
 
   
  0.870
WL94_26065
annotation not available (132 aa)
 
     
  0.791
pcaD
protocat_pcaD- 3-oxoadipate enol-lactonase (261 aa)
 
     
  0.781
WL94_02335
pcaR_pcaU- beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family protein (262 aa)
 
     
  0.709
WL94_02710
annotation not available (630 aa)
 
     
  0.647
pcaQ
LysR family transcriptional regulator; TF_pcaQ- pca operon transcription factor PcaQ (328 aa)
 
     
  0.623
WI67_09810
annotation not available (144 aa)
 
     
  0.602
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (13%) [HD]