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gtdA protein (Burkholderia cepacia) - STRING interaction network
"gtdA" - Gentisate_1_2: gentisate 1,2-dioxygenase in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtdAGentisate_1_2- gentisate 1,2-dioxygenase (347 aa)    
Predicted Functional Partners:
WL94_13985
maiA- maleylacetoacetate isomerase (214 aa)
   
 
  0.937
mhbM
annotation not available (402 aa)
 
     
  0.907
WL94_12810
annotation not available (314 aa)
 
   
  0.837
WL94_12795
maiA- maleylacetoacetate isomerase (213 aa)
 
   
  0.786
WI67_22960
annotation not available (232 aa)
 
   
  0.750
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate (444 aa)
           
  0.613
WL94_12785
annotation not available (453 aa)
 
     
  0.592
WL94_37415
Catechol_proteo- catechol 1,2-dioxygenase (313 aa)
           
  0.572
WL94_27205
Catechol_proteo- catechol 1,2-dioxygenase (300 aa)
           
  0.572
DM42_4996
Catechol_2_3- catechol 2,3 dioxygenase (314 aa)
           
  0.521
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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