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pgaA protein (Burkholderia cepacia) - STRING interaction network
"pgaA" - PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgaAPGA_TPR_OMP- poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA (877 aa)    
Predicted Functional Partners:
pgaC
pgaC_IcaA- poly-beta-1,6 N-acetyl-D-glucosamine synthase (423 aa)
 
   
  0.986
pgaB
deacetyl_PgaB- poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB (698 aa)
 
   
  0.974
DM42_3865
Conserved hypothetical protein (162 aa)
              0.816
DM42_1169
Autotrans_barl- outer membrane autotransporter barrel domain protein (1767 aa)
 
     
  0.774
epaO
spaO_YscQ- type III secretion apparatus protein, YscQ/HrcQ family (383 aa)
 
   
  0.773
DM42_1642
Conserved hypothetical protein (182 aa)
   
          0.757
DM42_1824
Conserved hypothetical protein (301 aa)
   
          0.753
DM42_118
annotation not available (247 aa)
   
          0.746
VL15_00700
annotation not available (438 aa)
   
          0.734
DM42_5324
annotation not available (192 aa)
   
          0.710
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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