STRINGSTRING
xsc protein (Burkholderia cepacia) - STRING interaction network
"xsc" - Sulphoacet_xsc: sulfoacetaldehyde acetyltransferase in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xscSulphoacet_xsc- sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family (605 aa)    
Predicted Functional Partners:
pta
Pta- phosphate acetyltransferase (344 aa)
 
   
  0.976
ackA
ackA- acetate kinase (399 aa)
       
  0.934
DM42_4865
annotation not available (343 aa)
       
  0.926
DM42_7194
annotation not available (448 aa)
   
 
  0.907
WL94_04765
annotation not available (308 aa)
         
    0.900
WI67_08455
annotation not available (282 aa)
         
    0.900
WL94_09015
annotation not available (255 aa)
 
     
  0.883
WL94_09000
annotation not available (132 aa)
 
          0.878
WL94_09020
annotation not available (573 aa)
 
          0.791
WL94_09055
annotation not available (471 aa)
 
     
  0.753
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (13%) [HD]