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STRINGSTRING
DM42_3917 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3917" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3917annotation not available (978 aa)    
Predicted Functional Partners:
WL94_09040
annotation not available (247 aa)
  0.999
WL94_09035
annotation not available (315 aa)
 
  0.994
fdxH
FDH-beta- formate dehydrogenase, beta subunit (304 aa)
 
 
  0.992
fdhE
Protein FdhE homolog; Necessary for formate dehydrogenase activity (311 aa)
   
 
  0.988
WL94_05490
annotation not available (1395 aa)
   
0.941
WI67_21565
annotation not available (289 aa)
   
 
  0.926
WL94_05530
annotation not available (594 aa)
       
  0.913
WI67_13360
annotation not available (559 aa)
       
  0.913
cysH
Thioredoxin-dependent 5’-adenylylsulfate reductase; Reduction of activated sulfate into sulfite. Uses adenylyl sulfate as substrate and thioredoxin as electron donor; Belongs to the PAPS reductase family. CysH subfamily (250 aa)
       
  0.911
WL94_04765
annotation not available (308 aa)
         
    0.900
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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