STRINGSTRING
DM42_3932 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3932" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3932annotation not available (349 aa)    
Predicted Functional Partners:
WL94_34885
annotation not available (296 aa)
    
          0.699
DM42_6439
annotation not available (292 aa)
    
          0.667
DM42_3933
TAT_signal_seq- Tat (twin-arginine translocation) pathway signal sequence domain protein (614 aa)
 
        0.662
DM42_6778
annotation not available (297 aa)
    
          0.627
DM42_5694
annotation not available (293 aa)
    
          0.623
DM42_4495
annotation not available (291 aa)
    
          0.610
DM42_6774
annotation not available (306 aa)
    
          0.606
WI67_09250
annotation not available (297 aa)
    
          0.605
WL94_10575
annotation not available (310 aa)
    
          0.590
DM42_336
annotation not available (296 aa)
    
          0.582
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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