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DM42_3936 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3936" - HAD_type_II: haloacid dehalogenase, type II in Burkholderia cepacia
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3936HAD_type_II- haloacid dehalogenase, type II (240 aa)    
Predicted Functional Partners:
WL94_30670
HAD_type_II- haloacid dehalogenase, type II (253 aa)
   
   
 
0.846
WI67_15830
annotation not available (298 aa)
 
   
  0.841
WL94_18400
HAD_type_II- haloacid dehalogenase, type II (222 aa)
   
   
 
0.812
WI67_02320
Haloacid dehalogenase; HAD-SF-IA-v3- HAD hydrolase, IA, variant 3 family protein (207 aa)
         
    0.800
DM42_6772
annotation not available (482 aa)
         
    0.650
WL94_33650
annotation not available (479 aa)
         
    0.650
WL94_39135
annotation not available (486 aa)
         
    0.650
WI67_30435
annotation not available (503 aa)
         
    0.650
WL94_32365
annotation not available (479 aa)
         
    0.650
WL94_09125
annotation not available (212 aa)
   
   
  0.525
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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