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DM42_3966 protein (Burkholderia cepacia) - STRING interaction network
"DM42_3966" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_3966annotation not available (280 aa)    
Predicted Functional Partners:
WL94_09300
annotation not available (355 aa)
 
  0.990
WI67_22265
annotation not available (281 aa)
 
  0.981
DM42_6835
annotation not available (270 aa)
 
  0.947
WL94_28055
ssuA_fam- ABC transporter, substrate-binding , aliphatic sulfonates family protein (329 aa)
 
 
  0.937
DM42_7400
ssuA_fam- ABC transporter, substrate-binding , aliphatic sulfonates family protein (323 aa)
 
 
  0.934
WI67_22240
ssuA_fam- ABC transporter, substrate-binding , aliphatic sulfonates family protein (330 aa)
 
 
  0.933
WL94_12190
ssuA_fam- ABC transporter, substrate-binding , aliphatic sulfonates family protein (317 aa)
 
 
  0.931
DM42_6837
ssuA_fam- ABC transporter, substrate-binding , aliphatic sulfonates family protein (330 aa)
 
 
  0.927
DM42_4535
annotation not available (368 aa)
 
 
  0.925
WL94_28160
Aliphatic sulfonates import ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system (320 aa)
 
  0.922
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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