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STRINGSTRING
DM42_4020 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4020" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4020annotation not available (204 aa)    
Predicted Functional Partners:
DM42_4023
annotation not available (82 aa)
              0.792
DM42_4022
Portal_lambda- phage portal protein, lambda family (544 aa)
              0.792
DM42_4021
annotation not available (296 aa)
              0.792
DM42_4024
annotation not available (728 aa)
              0.789
DM42_4019
annotation not available (225 aa)
              0.731
DM42_4018
annotation not available (348 aa)
              0.497
DM42_4017
annotation not available (88 aa)
              0.497
DM42_4016
annotation not available (107 aa)
              0.497
DM42_4015
annotation not available (187 aa)
              0.497
DM42_4014
Conserved hypothetical protein (66 aa)
              0.497
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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