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DM42_4035 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4035" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4035Conserved hypothetical protein (58 aa)    
Predicted Functional Partners:
DM42_4037
Conserved hypothetical protein (99 aa)
              0.845
DM42_4036
phage_O_Nterm- phage replication protein O, N-terminal domain (421 aa)
              0.845
DM42_4034
Conserved hypothetical protein (207 aa)
              0.845
DM42_4033
annotation not available (194 aa)
              0.845
DM42_4032
Conserved hypothetical protein (142 aa)
              0.845
DM42_4031
annotation not available (110 aa)
              0.845
DM42_4030
Conserved hypothetical protein (162 aa)
              0.845
DM42_4029
annotation not available (79 aa)
              0.845
DM42_4028
Conserved hypothetical protein (75 aa)
              0.742
DM42_4027
Conserved hypothetical protein (132 aa)
              0.673
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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