Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_1419 | carA | DM42_1419 | DM42_431 | annotation not available | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family | 0.954 |
DM42_1419 | carB | DM42_1419 | DM42_429 | annotation not available | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family | 0.984 |
DM42_1419 | guaA | DM42_1419 | DM42_3109 | annotation not available | Gmp synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP | 0.823 |
DM42_1419 | purF | DM42_1419 | DM42_4088 | annotation not available | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine | 0.959 |
DM42_1419 | purL | DM42_1419 | DM42_3186 | annotation not available | Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate | 0.724 |
DM42_1419 | purM | DM42_1419 | DM42_1077 | annotation not available | purM: phosphoribosylformylglycinamidine cyclo-ligase | 0.526 |
DM42_1419 | purN | DM42_1419 | DM42_2557 | annotation not available | Phosphoribosylglycinamide formyltransferase 1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate | 0.636 |
DM42_6413 | carB | DM42_6413 | DM42_429 | annotation not available | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family | 0.428 |
DM42_6413 | guaA | DM42_6413 | DM42_3109 | annotation not available | Gmp synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP | 0.810 |
DM42_6413 | purF | DM42_6413 | DM42_4088 | annotation not available | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine | 0.980 |
DM42_6413 | purH | DM42_6413 | DM42_1151 | annotation not available | Bifunctional purine biosynthesis protein PurH; purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | 0.826 |
DM42_6413 | purL | DM42_6413 | DM42_3186 | annotation not available | Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate | 0.975 |
DM42_6413 | purM | DM42_6413 | DM42_1077 | annotation not available | purM: phosphoribosylformylglycinamidine cyclo-ligase | 0.867 |
DM42_6413 | purN | DM42_6413 | DM42_2557 | annotation not available | Phosphoribosylglycinamide formyltransferase 1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate | 0.684 |
carA | DM42_1419 | DM42_431 | DM42_1419 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family | annotation not available | 0.954 |
carA | carB | DM42_431 | DM42_429 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family | 0.999 |
carA | guaA | DM42_431 | DM42_3109 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family | Gmp synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP | 0.712 |
carA | purD | DM42_431 | DM42_2766 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family | Phosphoribosylamine---glycine ligase; Belongs to the GARS family | 0.633 |
carA | purF | DM42_431 | DM42_4088 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine | 0.956 |
carA | purH | DM42_431 | DM42_1151 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family | Bifunctional purine biosynthesis protein PurH; purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | 0.614 |
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