STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4115annotation not available (89 aa)    
Predicted Functional Partners:
sdhC
Succinate dehydrogenase / fumarate reductase, cytochrome b subunit; succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit
 
  
 0.920
sdhA
Succinate dehydrogenase / fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily
  
 
 0.914
sdhD
Succinate dehydrogenase / fumarate reductase, membrane anchor subunit; Succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein
 
    0.904
sdhB
Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family
  
  
 0.895
gltA
Citrate (si)-synthase; Belongs to the citrate synthase family
  
    0.769
DM42_2629
Hypothetical protein; DUF3460 domain-containing protein
  
     0.768
DM42_3097
Hypothetical protein; NfeD family protein; nfeD-like C-terminal, partner-binding family protein
  
     0.760
DM42_7014
Hypothetical protein; DUF2909 domain-containing protein
  
     0.756
DM42_3266
annotation not available
  
     0.737
DM42_2157
Hypothetical protein; Uncharacterized protein
  
     0.710
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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