STRINGSTRING
DM42_4127 protein (Burkholderia cepacia) - STRING interaction network
"DM42_4127" - Mll2253 protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_4127Mll2253 protein (145 aa)    
Predicted Functional Partners:
WI67_21795
annotation not available (107 aa)
 
     
  0.973
DM42_4126
Domain of unknown function family protein (146 aa)
 
          0.938
DM42_1135
annotation not available (110 aa)
 
     
  0.611
DM42_3123
annotation not available (405 aa)
   
          0.600
DM42_1134
Conserved hypothetical protein (154 aa)
   
          0.553
DM42_5848
tfoX N-terminal domain protein (179 aa)
 
          0.524
WL94_32850
annotation not available (247 aa)
 
          0.499
DM42_4501
Conserved hypothetical protein (122 aa)
   
          0.466
WL94_30945
annotation not available (228 aa)
 
          0.448
WI67_10850
annotation not available (406 aa)
   
          0.426
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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